Adding MCP Tools

VerifiedSafe

Guide for adding new MCP tools with consistent patterns for schemas, tool definitions, registry updates, and Better Auth integration.

Sby Skills Guide Bot
DevelopmentIntermediate
7/26/2026
Claude CodeCursorCodex
#mcp#zod#typescript#code-generation#api-design

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Automated summary

A step-by-step guide for adding a new MCP tool domain to the Studio codebase, covering Zod schemas, defineTool, access control, and Better Auth integration.

Strengths

  • Enforces a repeatable file layout (schema.ts, create.ts, list.ts, update.ts, delete.ts, index.ts).
  • Makes the authorization sequence explicit: requireAuth, requireOrganization, ctx.access.check(), getUserId.
  • Shows the two integration paths available: ctx.boundAuth for Better Auth and ctx.storage for custom storage.
  • Every tool gets both input and output Zod schemas, which keeps contracts from drifting.

Limitations

  • Tightly coupled to the internal Studio codebase: the paths and helpers do not transfer as-is.
  • The supplied document is truncated: the final barrel export and the MCP registry registration step are not shown.
  • No guidance on testing or validating the newly created tools.
When to use it

Use it when adding a new CRUD-style MCP tool domain (create/list/update/delete) to the Studio API.

When not to use it

Avoid it on a different codebase or for a tool that does not follow the standard create/list/update/delete shape.

Security analysis

Safe
Quality score85/100

This is a documentation/guide skill describing patterns for adding MCP tools. It contains code snippets for Zod schemas, tool definitions, auth checks, and registry updates, but no shell commands, destructive actions, exfiltration, obfuscation, or disabling of safety features. The instructions are purely educational and implementation-focused.

No concerns found

How this analysis is made

Examples

Scaffold a new webhooks tool domain
Add a new `webhooks` MCP tool domain to apps/api/src/tools, with create, list, update and delete tools that follow the existing schema/defineTool/barrel-export pattern.
Write only the Zod schemas
Create apps/api/src/tools/secrets/schema.ts with the entity schema plus create, list, update and delete input/output Zod schemas, matching the conventions used by the existing tools.
Audit a tool's auth checks
Review my new apiKeys create tool: it should call requireAuth, requireOrganization and ctx.access.check() before touching ctx.boundAuth, and return the created item in the defined output schema.

name: add-mcp-tools description: Guide for adding new MCP tools with consistent patterns for schemas, tool definitions, registry updates, and Better Auth integration

Adding New MCP Tools to Studio

This guide documents the pattern for adding new MCP tools to Studio codebase. Follow this checklist to ensure consistency with existing tools.

Overview

MCP tools are exposed via the Model Context Protocol and allow programmatic management of resources. Each tool follows a consistent pattern with:

  • Zod schemas for input/output validation
  • defineTool for automatic tracing, metrics, and audit logging
  • Access control via ctx.access.check()
  • Better Auth integration via ctx.boundAuth

File Structure

When adding a new domain of tools (e.g., apiKeys, webhooks, secrets), create the following structure:

apps/api/src/tools/<domain>/
├── schema.ts     # Zod schemas for entities and operations
├── create.ts     # <DOMAIN>_CREATE tool
├── list.ts       # <DOMAIN>_LIST tool
├── update.ts     # <DOMAIN>_UPDATE tool  
├── delete.ts     # <DOMAIN>_DELETE tool
└── index.ts      # Barrel export

Step-by-Step Checklist

1. Create Schema File (schema.ts)

Define Zod schemas for:

  • Entity schema: The resource returned in list/get operations
  • Create input/output schemas: Input for creation, output includes created entity
  • Update input/output schemas: Partial updates
  • Delete input/output schemas: ID input, success confirmation output
// apps/api/src/tools/<domain>/schema.ts
import { z } from "zod";

// Entity schema (what's returned in list operations)
export const MyEntitySchema = z.object({
  id: z.string(),
  name: z.string(),
  // ... other fields
  createdAt: z.union([z.string(), z.date()]),
});

export type MyEntity = z.infer<typeof MyEntitySchema>;

// Create schemas
export const MyCreateInputSchema = z.object({
  name: z.string().min(1).max(255),
  // ... other fields
});

export const MyCreateOutputSchema = z.object({
  item: MyEntitySchema,
});

// List schemas
export const MyListInputSchema = z.object({
  // pagination, filters, etc.
});

export const MyListOutputSchema = z.object({
  items: z.array(MyEntitySchema),
});

// Update schemas
export const MyUpdateInputSchema = z.object({
  id: z.string(),
  // ... partial fields
});

export const MyUpdateOutputSchema = z.object({
  item: MyEntitySchema,
});

// Delete schemas
export const MyDeleteInputSchema = z.object({
  id: z.string(),
});

export const MyDeleteOutputSchema = z.object({
  success: z.boolean(),
  id: z.string(),
});

2. Create Tool Files

Each tool file follows this pattern:

// apps/api/src/tools/<domain>/create.ts
import { defineTool } from "../../core/define-tool";
import { getUserId, requireAuth, requireOrganization } from "../../core/studio-context";
import { MyCreateInputSchema, MyCreateOutputSchema } from "./schema";

export const MY_DOMAIN_CREATE = defineTool({
  name: "MY_DOMAIN_CREATE",
  description: "Create a new resource",

  inputSchema: MyCreateInputSchema,
  outputSchema: MyCreateOutputSchema,

  handler: async (input, ctx) => {
    // 1. Require authentication
    requireAuth(ctx);
    
    // 2. Require organization (if org-scoped)
    const organization = requireOrganization(ctx);
    
    // 3. Check authorization
    await ctx.access.check();
    
    // 4. Get user ID
    const userId = getUserId(ctx);
    if (!userId) {
      throw new Error("User ID required");
    }
    
    // 5. Perform operation
    // Option A: Use ctx.boundAuth for Better Auth operations
    const result = await ctx.boundAuth.myDomain.create({ ... });
    
    // Option B: Use ctx.storage for custom storage operations
    const result = await ctx.storage.myDomain.create({ ... });
    
    // 6. Return result
    return { item: result };
  },
});

3. Create Barrel Export (index.ts)

// apps/api/src/tools/<domain>/index.ts
export { MY_DOMAIN_CREATE } from "./create";
export { MY_DOMAIN_LIST } from "./list";
export { MY_DOMAIN_UPDATE } from "./update";
export { MY_DOMAIN_DELETE } from "./delete";

// Export schemas for external use
export * from "./schema";

4. Update Tool Registry (registry.ts)

Add tool names and metadata:

// apps/api/src/tools/registry.ts

// 1. Add to ToolCategory type (if new category)
export type ToolCategory = "Organizations" | "Connections" | "My Domain";

// 2. Add to ALL_TOOL_NAMES array
const ALL_TOOL_NAMES = [
  // ... existing tools
  "MY_DOMAIN_CREATE",
  "MY_DOMAIN_LIST",
  "MY_DOMAIN_UPDATE",
  "MY_DOMAIN_DELETE",
] as const;

// 3. Add to MANAGEMENT_TOOLS array
export const MANAGEMENT_TOOLS: ToolMetadata[] = [
  // ... existing tools
  {
    name: "MY_DOMAIN_CREATE",
    description: "Create resource",
    category: "My Domain",
  },
  {
    name: "MY_DOMAIN_LIST",
    description: "List resources",
    category: "My Domain",
  },
  {
    name: "MY_DOMAIN_UPDATE",
    description: "Update resource",
    category: "My Domain",
  },
  {
    name: "MY_DOMAIN_DELETE",
    description: "Delete resource",
    category: "My Domain",
    dangerous: true,
  },
];

// 4. Add to TOOL_LABELS
const TOOL_LABELS: Record<ToolName, string> = {
  // ... existing labels
  MY_DOMAIN_CREATE: "Create resource",
  MY_DOMAIN_LIST: "List resources",
  MY_DOMAIN_UPDATE: "Update resource",
  MY_DOMAIN_DELETE: "Delete resource",
};

// 5. Update getToolsByCategory if new category
export function getToolsByCategory() {
  const grouped: Record<string, ToolMetadata[]> = {
    Organizations: [],
    Connections: [],
    "My Domain": [], // Add new category
  };
  // ...
}

5. Register Tools (tools/index.ts)

// apps/api/src/tools/index.ts
import * as MyDomainTools from "./myDomain";

export { MyDomainTools };

export const ALL_TOOLS = [
  // ... existing tools
  MyDomainTools.MY_DOMAIN_CREATE,
  MyDomainTools.MY_DOMAIN_LIST,
  MyDomainTools.MY_DOMAIN_UPDATE,
  MyDomainTools.MY_DOMAIN_DELETE,
] as const satisfies { name: ToolName }[];

6. Add to Default Permissions (if needed)

// apps/api/src/auth/index.ts
apiKey({
  permissions: {
    defaultPermissions: {
      self: [
        // ... existing permissions
        "MY_DOMAIN_LIST", // Read access by default
        // Note: CREATE, UPDATE, DELETE usually NOT default
      ],
    },
  },
}),

7. Add Better Auth Integration (if wrapping Better Auth API)

If your tools wrap Better Auth APIs, you need to:

a. Add types to studio-context.ts:

// apps/api/src/core/studio-context.ts

// Add return types
export type MyDomainCreateResult = Awaited<
  ReturnType<BetterAuthApi["createMyDomain"]>
>;
// ... other types

// Add to BoundAuthClient interface
export interface BoundAuthClient {
  // ... existing methods
  
  myDomain: {
    create(data: { ... }): Promise<MyDomainCreateResult>;
    list(): Promise<MyDomainListResult>;
    update(data: { ... }): Promise<MyDomainUpdateResult>;
    delete(id: string): Promise<void>;
  };
}

b. Implement in context-factory.ts:

// apps/api/src/core/context-factory.ts
function createBoundAuthClient(ctx: AuthContext): BoundAuthClient {
  return {
    // ... existing implementations
    
    myDomain: {
      create: async (data) => {
        return auth.api.createMyDomain({ headers, body: data });
      },
      list: async () => {
        return auth.api.listMyDomain({ headers });
      },
      update: async (data) => {
        return auth.api.updateMyDomain({ headers, body: data });
      },
      delete: async (id) => {
        await auth.api.deleteMyDomain({ headers, body: { id } });
      },
    },
  };
}

8. Document in Spec

Add documentation to apps/api/spec/001.md:

#### My Domain Management

Description of what this domain manages.

**MY_DOMAIN_CREATE**

\`\`\`typescript
// Create example
POST /mcp/tools/MY_DOMAIN_CREATE
{ "name": "Example" }
// Response
{ "item": { "id": "...", "name": "Example", ... } }
\`\`\`

// ... other tools

Key Patterns to Follow

Authentication & Authorization

// Always in this order:
requireAuth(ctx);                    // 1. Must be authenticated
const org = requireOrganization(ctx); // 2. Must have org context (if org-scoped)
await ctx.access.check();            // 3. Must have permission for this tool

Error Handling

// Throw descriptive errors
if (!result) {
  throw new Error(`Resource not found: ${id}`);
}

if (result.organizationId !== organization.id) {
  throw new Error("Resource not found in organization");
}

Sensitive Data

For sensitive data (like API key values):

// Only return sensitive data at creation time
export const CreateOutputSchema = z.object({
  id: z.string(),
  secretValue: z.string(), // Only here!
});

// Never return in list/get
export const EntitySchema = z.object({
  id: z.string(),
  // NO secretValue field
});

Testing

Create test files alongside tool files:

apps/api/src/tools/<domain>/
├── create.test.ts
├── list.test.ts
├── update.test.ts
└── delete.test.ts

Use the existing test patterns from apps/api/src/tools/connection/ as reference.

Common Mistakes to Avoid

  1. Forgetting await ctx.access.check() - Always check authorization
  2. Missing tool registration - Update both registry.ts AND tools/index.ts
  3. Inconsistent naming - Use DOMAIN_ACTION pattern (e.g., API_KEY_CREATE)
  4. Missing default permissions - Add to auth/index.ts if users should have access by default
  5. Exposing sensitive data - Only return secrets at creation time
  6. Missing organization check - Use requireOrganization(ctx) for org-scoped resources

From the file to a first result

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View the source and supporting files

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1. Download the file

Download SKILL.md

From the root of a test project, save the file as .skill-downloads/adding-mcp-tools-ms1aw5y8/SKILL.md, or use the command below. This folder is for inspecting the skill before installation.

Command for macOS/Linux or WSL: requires a POSIX shell and curl. On Windows without WSL, use the download button and create the folder manually.

mkdir -p '.skill-downloads/adding-mcp-tools-ms1aw5y8' && curl --fail --show-error --location 'https://skills-guides.com/api/skills/adding-mcp-tools-ms1aw5y8/download' --output '.skill-downloads/adding-mcp-tools-ms1aw5y8/SKILL.md.part' && mv '.skill-downloads/adding-mcp-tools-ms1aw5y8/SKILL.md.part' '.skill-downloads/adding-mcp-tools-ms1aw5y8/SKILL.md'

2. Check prerequisites

Read SKILL.md before using it. If it references scripts or external services, inspect them and prepare the required access in your test environment.

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3. Load the skill

After inspection, copy the complete folder into your project using one of the commands below, then open a new tool session. The command stops if a folder with the same name already exists: compare the files before replacing it.

Claude Code
test -f '.skill-downloads/adding-mcp-tools-ms1aw5y8/SKILL.md' && test -s '.skill-downloads/adding-mcp-tools-ms1aw5y8/SKILL.md' && mkdir -p '.claude/skills' && test ! -e '.claude/skills/add-mcp-tools' && cp -R '.skill-downloads/adding-mcp-tools-ms1aw5y8' '.claude/skills/add-mcp-tools'

Cursor
test -f '.skill-downloads/adding-mcp-tools-ms1aw5y8/SKILL.md' && test -s '.skill-downloads/adding-mcp-tools-ms1aw5y8/SKILL.md' && mkdir -p '.cursor/skills' && test ! -e '.cursor/skills/add-mcp-tools' && cp -R '.skill-downloads/adding-mcp-tools-ms1aw5y8' '.cursor/skills/add-mcp-tools'

Codex
test -f '.skill-downloads/adding-mcp-tools-ms1aw5y8/SKILL.md' && test -s '.skill-downloads/adding-mcp-tools-ms1aw5y8/SKILL.md' && mkdir -p '.agents/skills' && test ! -e '.agents/skills/add-mcp-tools' && cp -R '.skill-downloads/adding-mcp-tools-ms1aw5y8' '.agents/skills/add-mcp-tools'

OpenSkills

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Official OpenSkills installation
openskills install './.skill-downloads/adding-mcp-tools-ms1aw5y8'

openskills read 'adding-mcp-tools-ms1aw5y8'

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For an agent that reads AGENTS.md, then sync the index. This command changes AGENTS.md: review the diff before using it.

openskills sync

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4. Try a first task

Use a short, synthetic input: an API endpoint, a small document or an interface brief. In a new conversation, attach the file or give the agent its path, then adapt this request:

Read .skill-downloads/adding-mcp-tools-ms1aw5y8/SKILL.md and apply its instructions to this example: [describe a test input]. Identify any missing files, dependencies or access. Produce the result requested by the skill without inventing data or running unreviewed scripts.

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