Our review
This skill performs a two-phase audit of a research project, verifying pipeline integrity (scripts, data, params) and manuscript consistency (figures, tables, references).
Strengths
- Comprehensive check of both code and manuscript
- Catches missing files and undocumented references
- Clearly separates pipeline and manuscript audits
- Non-destructive (doesn't fix without approval)
Limitations
- Requires README tables and params.do to be up-to-date
- Assumes a specific project structure
- May produce many findings if project is not well-maintained
Use before submission or after significant changes to ensure all outputs are reproducible and manuscript references are valid.
Not for ad-hoc checks or when the project lacks structured README tables and parameter files.
Security analysis
SafeThis skill is a manual checklist for project integrity checks. It does not instruct the AI to execute any commands, access external resources, or take destructive actions. It poses no execution risk.
No concerns found
Examples
Run the full project integrity check for this repository.Audit only Phase 2 — verify all figure and table references in manuscript.tex resolve to existing files.Run Phase 1 to ensure every script and data file in the README pipeline table exists and is in the correct directory.Run a full project integrity check. Two phases:
Phase 1 — Pipeline integrity: (1) Every script listed in README pipeline table exists. (2) Every input data file listed exists. (3) No scripts or data files sitting in wrong directories. (4) Output directories exist. (5) params.do values match README parameters table.
Phase 2 — Manuscript audit: (1) Every entry in README table/figure map has an existing output file and source script. (2) Every \includegraphics and \input in manuscript.tex resolves to an existing file. (3) Find any output files not referenced in the manuscript (orphans). (4) Find any manuscript references not in the table/figure map (undocumented).
Report all findings. Do not fix anything without user approval.
Next.js App Router Expert
Development
A skill that turns Claude into a Next.js App Router expert.
README Generator
Development
Creates professional and comprehensive README.md files for your projects.
API Documentation Writer
Development
Generates comprehensive API documentation in OpenAPI/Swagger format.